Publications

Day SE, Coletta RL, Kim JY, Campbell LE, Benjamin TR, Roust LR, De Filippis EA, Dinu V, Shaibi GQ, Mandarino LJ, Coletta DK (2016). Next-generation sequencing methylation profiling of subjects with obesity identifies novel gene changes. Clinical Epigenetics. 8:77. http://doi.org/10.1186/s13148-016-0246-x

Lee PV, Dinu V (2015). BitTorious volunteer: server-side extensions for centrally-managed volunteer storage in BitTorrent swarms. BMC Bioinformatics. 16:364. http://doi.org/10.1186/s12859-015-0779-6

Huentelman MJ, Muppana L, Corneveaux JJ, Dinu V, Pruzin JJ, Reiman R, Borish CN, De Both M, Ahmed A, Todorov A, Cloninger CR, Zhang R, Ma J, Gallitano AL (2015). Association of SNPs in EGR3 and ARC with Schizophrenia Supports a Biological Pathway for Schizophrenia Risk. PloS one. 10(10):e0135076. http://doi.org/10.1371/journal.pone.0135076

Brown JR, Dinu V (2015). Ratios and Housekeeper Normalization. Journal of Biometrics and Biostatistics. 6(252):2. http://doi.org/10.4172/2155-6180.1000252

Mielke CJ, Mandarino LJ, Dinu V (2014). AMASS: a database for investigating protein structures. Bioinformatics. 30(11):1595-1600. http://doi.org/10.1093/bioinformatics/btu073

Lee PV, Dinu V (2014). BitTorious: global controlled genomics data publication, research and archiving via BitTorrent extensions. BMC Bioinformatics. 15(1):424. http://doi.org/10.1186/s12859-014-0424-9

Kocher JP, Quest DJ, Duffy P, Meiners MA, Moore RM, Rider D, Hossain A, Hart SN, Dinu V (2014). The Biological Reference Repository (BioR): a rapid and flexible system for genomics annotation. Bioinformatics. 30(13):1920-1922. http://doi.org/10.1093/bioinformatics/btu137

Bradley BS, Loftus JC, Mielke CJ, Dinu V (2014). Differential expression of microRNAs as predictors of glioblastoma phenotypes. BMC Bioinformatics. 15(1):21. http://doi.org/10.1186/1471-2105-15-21

Huang K, Yellapantula V, Baier L, Dinu V (2013). NGSPE: A pipeline for end-to-end analysis of DNA sequencing data and comparison between different platforms. Computers in Biology and Medicine. 43(9):1171-1176. http://doi.org/10.1016/j.compbiomed.2013.05.025

Brown JR, Dinu V (2013). High performance computing methods for the integration and analysis of biomedical data using SAS. Computer Methods and Programs in Biomedicine. 112(3):553-562. http://doi.org/10.1016/j.cmpb.2013.07.003

Gallitano AL, Tillman R, Dinu V, Geller B (2012). Family-based association study of early growth response gene 3 with child bipolar I disorder. Journal of Affective Disorders. 138(3):387-396. http://doi.org/10.1016/j.jad.2012.01.011

Briones N, Dinu V (2012). Data mining of high density genomic variant data for prediction of Alzheimer’s disease risk. BMC Medical Genetics. 13:7. http://doi.org/10.1186/1471-2350-13-7

Brown JR, Stafford P, Johnston SA, Dinu V (2011). Statistical methods for analyzing immunosignatures. BMC Bioinformatics. 12:349. http://doi.org/10.1186/1471-2105-12-349

Kriseman J, Busick C, Szelinger S, Dinu V (2010). BING: biomedical informatics pipeline for Next Generation Sequencing. Journal of Biomedical Informatics. 43(3):428-434. http://doi.org/10.1016/j.jbi.2009.11.003

Li C, Li Y, Zhang X, Stafford P, Dinu V (2009). ICRPfinder: a fast pattern design algorithm for coding sequences and its application in finding potential restriction enzyme recognition sites. BMC Bioinformatics. 10:286. http://doi.org/10.1186/1471-2105-10-286

Xiang B, Li A, Dinu V, Nowak NJ, Zhao H, Li P (2008). Analytical and clinical validity of whole-genome oligonucleotide array comparative genomic hybridization for pediatric patients with mental retardation and developmental delay. American Journal of Medical Genetics. 146A(15):1942-1954. http://doi.org/10.1002/ajmg.a.32411

Dinu V, Zhao H, Miller PL (2007). Integrating domain knowledge with statistical and data mining methods for high-density genomic SNP disease association analysis. Journal of Biomedical Informatics. 40(6):750-760. http://doi.org/10.1016/j.jbi.2007.06.002

Dinu V, Nadkarni P (2007). Guidelines for the effective use of entity-attribute-value modeling for biomedical databases. International Journal of Medical Informatics. 76(11-12):769-779. http://doi.org/10.1016/j.ijmedinf.2006.09.023

Dinu V, Miller PL, Zhao H (2007). Evidence for association between multiple complement pathway genes and AMD. Genetic Epidemiology. 31(3):224-237. http://doi.org/10.1002/gepi.20204

Dinu V, Nadkarni P, Brandt C (2006). Pivoting approaches for bulk extraction of Entity-Attribute-Value data. Computer Methods and Programs in Biomedicine. 82(1):38-43. http://doi.org/10.1016/j.cmpb.2006.02.001